Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_109782116_109783859_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109782116 - 109783859

Intron Length:

1744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTATTTTC

5'SS Class:

major

3'SS Sequence:

GTTTATTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTCTTTTGATG

Flanking Amino Acid:

CLNNLFLLLKDLRESYSTQQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

76.3

33.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

75.1

0.56

0.9

74.9

39.5

Minor 5ss

41.2

-1

2.7

53.8

43.2

Minor BPS

62.4

0.24

1.3

66.85

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034290

109753143 - 109784970

31828