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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109837345_109838640_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109837345 - 109838640

Intron Length:

1296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCACTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TTTCACTTAAAG

Flanking Amino Acid:

PAQREAEESKTEICDLEPGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

87.3

26.9

Major BPS

71.6

0.54

33.1

Major PPT

72.1

0.5

71.6

32.2

Minor 5ss

40.1

-1.1

2.8

53.2

37.3

Minor BPS

64.2

0.31

1.7

71.82

40.2

Associated Gene:

Gene:

GCFC2

Ensembl Gene ID:

ENSAPLG00000014163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014794

109837113 - 109852972

15860