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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109838797_109839433_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109838797 - 109839433

Intron Length:

637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCAATGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTCTCTTCAATG

Flanking Amino Acid:

PPGRRKDLSPVNIPSAACIE

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.2

76.2

39.9

Major BPS

78.2

0.7

79.9

32.6

Major PPT

75.6

0.58

0.9

70.3

33.9

Minor 5ss

29.8

-2.3

3.1

41.5

44.9

Minor BPS

63.4

0.28

1.6

67.06

41.5

Associated Gene:

Gene:

GCFC2

Ensembl Gene ID:

ENSAPLG00000014163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014794

109837113 - 109852972

15860