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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109846635_109847794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109846635 - 109847794

Intron Length:

1160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTATT

5'SS Class:

major

3'SS Sequence:

ATTACAAATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

AGTTCATTACAA

Flanking Amino Acid:

MEILKTCEQRRTCRRQVREQ

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.2

81.8

38.5

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

64.6

0.33

1.1

56.4

42.1

Minor 5ss

45.8

-0.4

68.3

42.6

Minor BPS

49.8

-0

65.49

40.1

Associated Gene:

Gene:

GCFC2

Ensembl Gene ID:

ENSAPLG00000014163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014794

109837113 - 109852972

15860