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Intron Name: Anas_platyrhynchos_platyrhynchos_3_109856482_109857439_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
109856482 - 109857439

Intron Length:
958

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGGGTTTT

5'SS Class:
strong_major

3'SS Sequence:
TTCTCTCCCTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGATCAT

U12 Branch Point Sequence:
TGATCATTAACC

Flanking Amino Acid:
FVLRNVIEDQGVEICYELYS

Intron Amino Acid Position:
144

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85
0.82
0.9
83.9
30.3

Major BPS
73
0.57
1.2
74
41.2

Major PPT
71
0.47
1
75.7
26.9

Minor 5ss
39.3
-1.2
3.3
57.3
47.4

Minor BPS
71.8
0.66
1.6
77.93
36.9

Associated Gene:

Gene:
MRPL19

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

109855152 - 109860180
5029