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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11001941_11002674_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11001941 - 11002674

Intron Length:

734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCGCG

5'SS Class:

major

3'SS Sequence:

GTTTCCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTGCTCACAGCC

Flanking Amino Acid:

KINLPESRVQVWFKNRRAKC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.33

1.3

51.7

45.5

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

80.1

0.68

0.8

70.6

36.2

Minor 5ss

41.1

-1

3.4

56.7

47.5

Minor BPS

40.7

-0.7

1.9

48.65

41.2

Associated Gene:

Gene:

OTX1

Ensembl Gene ID:

ENSAPLG00000024184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022014

11001188 - 11003369

2182