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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110284229_110341580_F

Intron Information:

Intron Rank:

126954

Intron Class:

major

Intron Phase:

Intron Coordinates:

110284229 - 110341580

Intron Length:

57352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTGTTCTCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

38.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

81.6

0.71

0.8

76.7

32.1

Minor 5ss

29.2

-2.4

2.5

25.1

36.7

Minor BPS

54.3

0.13

70.88

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037755

110284118 - 110346956

62839