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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110402127_110404232_R

Intron Information:

Intron Rank:

139406

Intron Class:

major

Intron Phase:

Intron Coordinates:

110402127 - 110404232

Intron Length:

2106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

AAAGCCACAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

27.6

Major BPS

0.57

73.6

28.6

Major PPT

93.5

0.98

0.7

92.3

26.6

Minor 5ss

38.2

-1.3

48.6

47.1

Minor BPS

46.6

-0.1

1.9

62.14

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040482

110401835 - 110406692

4858

ENSAPLT00000020077

110401835 - 110407931

6097