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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110646461_110647628_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110646461 - 110647628

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

TTTCAAGCAACA

Flanking Amino Acid:

LQKKNSLKKLRMYTISSHRD

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

83.3

Major BPS

0.57

1.2

77.7

37.1

Major PPT

77.4

0.62

0.7

71.8

26.5

Minor 5ss

42.9

-0.8

2.8

44.3

Minor BPS

42.3

-0.5

2.4

63.86

41.7

Associated Gene:

Gene:

OPN5

Ensembl Gene ID:

ENSAPLG00000014644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015258

110646397 - 110699572

53176

ENSAPLT00000024784

110646397 - 110664179

17783