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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110647874_110650939_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110647874 - 110650939

Intron Length:

3066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTCACAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ATTAATTTATTT

Flanking Amino Acid:

SHILEMKLTKVAMLICAGFL

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.8

38.5

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

65.1

0.34

65.1

35.3

Minor 5ss

35.1

-1.7

2.7

42.5

44.3

Minor BPS

51.2

0.11

1.8

71.96

39.2

Associated Gene:

Gene:

OPN5

Ensembl Gene ID:

ENSAPLG00000014644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015258

110646397 - 110699572

53176

ENSAPLT00000037110

110647278 - 110664064

16787

ENSAPLT00000024784

110646397 - 110664179

17783