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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110651275_110652964_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110651275 - 110652964

Intron Length:

1690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

AATTGTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TAACTCTTAAAT

Flanking Amino Acid:

RYLKICHLSYGTWLKRHHAF

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

77.8

0.69

78.2

31.8

Major PPT

76.8

0.6

0.9

66.6

44.2

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

66.4

0.59

1.4

77.09

38.4

Associated Gene:

Gene:

OPN5

Ensembl Gene ID:

ENSAPLG00000014644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037110

110647278 - 110664064

16787

ENSAPLT00000024784

110646397 - 110664179

17783

ENSAPLT00000015258

110646397 - 110699572

53176