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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110705144_110705242_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
110705144 - 110705242

Intron Length:
99

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTTGGG

5'SS Class:
major

3'SS Sequence:
TTTTAATCTACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
CTGTTTTTAATC

Flanking Amino Acid:
LLFGTLLDRKTREALKKNCL

Intron Amino Acid Position:
672

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.3
0.55
1.1
60.1
44.8

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
84.1
0.77
0.8
77.7
35.4

Minor 5ss
31.1
-2.2
3.3
41.2
45.1

Minor BPS
68
0.54
1.2
68.78
38

Associated Gene:

Gene:
ADGRF2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

110702032 - 110710856
8825