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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110705285_110705975_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
110705285 - 110705975

Intron Length:
691

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAACCCA

5'SS Class:
major

3'SS Sequence:
CCAATTTTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TGTTTTGTAACT

Flanking Amino Acid:
VTFALLNAFQGFFILLFGTL

Intron Amino Acid Position:
658

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.2
0.66
1
64.9
41.1

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
75
0.56
0.9
72.9
37.1

Minor 5ss
37.5
-1.4
3.1
48.7
47

Minor BPS
63.2
0.49
2
83.79
37.4

Associated Gene:

Gene:
ADGRF2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

110702032 - 110710856
8825