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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110718956_110720020_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

110718956 - 110720020

Intron Length:

1065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TAAAAACTGTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

GCTATCTTAAAA

Flanking Amino Acid:

V**TH*KKNMGENWKK*GRI

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

84.2

33.9

Major BPS

77.8

0.69

78.2

31.8

Major PPT

56.1

0.14

1.1

52.2

46.3

Minor 5ss

40.6

-1.1

51.6

45.1

Minor BPS

61.3

0.35

1.5

65.88

40.1

Associated Gene:

Gene:

CD2AP

Ensembl Gene ID:

ENSAPLG00000014709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015346

110716797 - 110790170

73374

ENSAPLT00000015343

110717775 - 110781697

63923

ENSAPLT00000022741

110716797 - 110768885

52089