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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110720212_110720838_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110720212 - 110720838

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TACTTCTTAGCC

Flanking Amino Acid:

VPNQSQLKQKSHLC*VHQFH

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

36.6

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

93.5

0.98

0.7

92.4

26.2

Minor 5ss

40.6

-1

2.8

52.4

44.8

Minor BPS

65.2

0.46

1.6

71.05

40.3

Associated Gene:

Gene:

CD2AP

Ensembl Gene ID:

ENSAPLG00000014709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022741

110716797 - 110768885

52089

ENSAPLT00000015346

110716797 - 110790170

73374

ENSAPLT00000015343

110717775 - 110781697

63923