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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110733138_110734287_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110733138 - 110734287

Intron Length:

1150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTCC

5'SS Class:

major

3'SS Sequence:

ACTTATTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATGTACTTATTT

Flanking Amino Acid:

FKYTNMIKTSLSQRNLLLQL

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.2

36.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.8

0.74

0.8

76.3

36.9

Minor 5ss

44.4

-0.6

2.8

40.1

Minor BPS

58.4

0.34

1.8

75.29

41.7

Associated Gene:

Gene:

CD2AP

Ensembl Gene ID:

ENSAPLG00000014709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015346

110716797 - 110790170

73374

ENSAPLT00000015343

110717775 - 110781697

63923

ENSAPLT00000022741

110716797 - 110768885

52089