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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110768765_110781696_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

110768765 - 110781696

Intron Length:

12932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGGAGA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

GTTGCACTCACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

63.3

42.8

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

94.3

0.5

93.3

15.5

Minor 5ss

31.9

-2.1

3.4

38.8

41.1

Minor BPS

45.2

-0.3

2.4

70.75

45.5

Associated Gene:

Gene:

CD2AP

Ensembl Gene ID:

ENSAPLG00000014709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015343

110717775 - 110781697

63923