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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110833750_110834443_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

110833750 - 110834443

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

CAAATTGTATCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.8

25.6

Major BPS

60.7

0.27

65.3

28.1

Major PPT

82.6

0.73

0.9

80.5

Minor 5ss

42.5

-0.8

3.1

45.7

Minor BPS

39.6

-0.8

44.01

37.9

Associated Gene:

Gene:

CENPQ

Ensembl Gene ID:

ENSAPLG00000015001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015646

110830219 - 110834559

4341