Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_110841685_110842347_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110841685 - 110842347

Intron Length:

663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCGTT

5'SS Class:

major

3'SS Sequence:

TGTATTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTGTCTTGTATT

Flanking Amino Acid:

IADIFQYTSKYMPKFNSISI

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

70.7

39.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

85.9

0.81

0.8

80.7

36.7

Minor 5ss

48.4

-0.1

3.2

73.2

43.6

Minor BPS

55.8

0.26

1.8

76.18

41.3

Associated Gene:

Gene:

MMUT

Ensembl Gene ID:

ENSAPLG00000015104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022673

110837560 - 110856442

18883

ENSAPLT00000015767

110837560 - 110858600

21041