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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110861170_110861761_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110861170 - 110861761

Intron Length:

592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

CTCTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTTAT

U12 Branch Point Sequence:

ATAGACTTATTC

Flanking Amino Acid:

FLVTNSSKTNSNKITKNTVR

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

71.6

33.8

Major BPS

65.9

0.39

1.2

57.6

41.3

Major PPT

88.6

0.87

0.7

24.1

Minor 5ss

32.8

-2

2.7

42.3

38.4

Minor BPS

48.2

-0.1

1.8

58.54

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015462

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016121

110859786 - 110864886

5101