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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11088935_11116981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11088935 - 11116981

Intron Length:

28047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATTCTTTTATCT

Flanking Amino Acid:

ASRELSSSPKPSPIPSPILG

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

62.5

0.47

1.5

79.22

36.9

Associated Gene:

Gene:

EHBP1

Ensembl Gene ID:

ENSAPLG00000006773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035880

11010262 - 11214893

204632

ENSAPLT00000021322

11010262 - 11214893

204632

ENSAPLT00000047278

11015122 - 11214893

199772

ENSAPLT00000007056

11010262 - 11189599

179338

ENSAPLT00000039191

11010262 - 11214893

204632

ENSAPLT00000036041

11010262 - 11214893

204632