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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110904788_110905158_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

110904788 - 110905158

Intron Length:

371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

AACTCTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

AGGTACTAAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.6

30.7

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

77.6

0.62

0.9

73.8

35.8

Minor 5ss

33.1

-1.9

3.2

40.3

40.2

Minor BPS

55.6

0.26

1.9

72.28

44.1

Associated Gene:

Gene:

CDC5L

Ensembl Gene ID:

ENSAPLG00000015586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016277

110904684 - 110934741

30058