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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110913832_110915222_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110913832 - 110915222

Intron Length:

1391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

AATATTCTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

ATCTTACTAATA

Flanking Amino Acid:

YSDPSYAKQLERESREHLRL

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

79.9

32.8

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

63.4

0.3

1.1

58.6

42.1

Minor 5ss

36.3

-1.6

41.5

Minor BPS

48.9

-0

1.9

63.12

37.2

Associated Gene:

Gene:

CDC5L

Ensembl Gene ID:

ENSAPLG00000015586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016277

110904684 - 110934741

30058

ENSAPLT00000039509

110900875 - 110955915

55041

ENSAPLT00000018622

110900875 - 110955915

55041