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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110915388_110916475_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110915388 - 110916475

Intron Length:

1088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGTAT

U12 Branch Point Sequence:

TAACACTTAGCT

Flanking Amino Acid:

DTADIEARKQALREAERAKE

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.5

32.7

Major BPS

62.7

0.32

1.4

63.4

Major PPT

75.6

0.58

0.9

69.2

41.8

Minor 5ss

34.9

-1.7

3.5

48.5

47.7

Minor BPS

55.7

0.26

1.8

73.47

42.3

Associated Gene:

Gene:

CDC5L

Ensembl Gene ID:

ENSAPLG00000015586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039509

110900875 - 110955915

55041

ENSAPLT00000018622

110900875 - 110955915

55041

ENSAPLT00000016277

110904684 - 110934741

30058