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Intron Name: Anas_platyrhynchos_platyrhynchos_3_110919989_110933246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

110919989 - 110933246

Intron Length:

13258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCGTTCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTCTGGATAATT

Flanking Amino Acid:

RIESLEKRLEINRGHMTTEA

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

1.2

80.7

33.6

Major BPS

73.8

0.59

0.9

26.8

Major PPT

75.7

0.58

72.1

Minor 5ss

32.7

-2

3.2

43.9

43.8

Minor BPS

45.5

-0.2

2.6

72.18

45.2

Associated Gene:

Gene:

CDC5L

Ensembl Gene ID:

ENSAPLG00000015586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039509

110900875 - 110955915

55041

ENSAPLT00000016277

110904684 - 110934741

30058