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Intron Name: Anas_platyrhynchos_platyrhynchos_3_1109368_1112303_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1109368 - 1112303

Intron Length:

2936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCTGCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

CCTTCCTCATCT

Flanking Amino Acid:

TFESKEQPEYDYIDGEGDWS

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

73.9

0.54

0.9

69.2

36.9

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

58.9

0.36

1.9

75.91

46.6

Associated Gene:

Gene:

ISM1

Ensembl Gene ID:

ENSAPLG00000011456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011931

1078499 - 1118287

39789