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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11131959_11132684_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
11131959 - 11132684

Intron Length:
726

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCTATGAG

5'SS Class:
major

3'SS Sequence:
ACTTAATTTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTATAT

U12 Branch Point Sequence:
TCCCACTTAATT

Flanking Amino Acid:
PSAKSASSSEELINKLNFLD

Intron Amino Acid Position:
247

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
62.4
0.29
1.3
58.3
40.9

Major BPS
79.2
0.73
1
75.3
39.4

Major PPT
72.4
0.5
0.9
63.1
42.4

Minor 5ss
32.9
-2
3.1
40.1
46

Minor BPS
63.3
0.5
1.5
74.17
42.9

Associated Gene:

Gene:
EHBP1

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11010262 - 11214893
204632

11010262 - 11214893
204632