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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111469773_111479494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111469773 - 111479494

Intron Length:

9722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTATTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTCTCTTATTT

Flanking Amino Acid:

FNPQGQSQITDPRQAQSSPP

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

28.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.2

0.86

0.7

80.5

36.7

Minor 5ss

30.7

-2.2

3.3

40.8

45.7

Minor BPS

68.2

0.65

1.5

84.89

35.8

Associated Gene:

Gene:

RUNX2

Ensembl Gene ID:

ENSAPLG00000011653

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043170

111353213 - 111572007

218795

ENSAPLT00000012168

111353213 - 111504847

151635