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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111696370_111715521_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111696370 - 111715521

Intron Length:

19152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CCTCTCCTAACC

Flanking Amino Acid:

IKNTKQQDNAALEKGLVKAL

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.8

35.2

Major BPS

0.87

0.8

85.6

Major PPT

79.7

0.67

0.8

75.8

32.8

Minor 5ss

29.8

-2.3

2.6

30.5

37.5

Minor BPS

54.6

0.12

1.7

63.96

41.7

Associated Gene:

Gene:

CLIC5

Ensembl Gene ID:

ENSAPLG00000013722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046418

111692133 - 111743715

51583

ENSAPLT00000014302

111693546 - 111758593

65048