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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111715629_111716982_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111715629 - 111716982

Intron Length:

1354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

AACCTCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

TACTCTCCAACC

Flanking Amino Acid:

EFLEETLAPPKYPKLAAKHR

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

80.9

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

74.5

0.55

0.9

35.5

Minor 5ss

37.8

-1.4

51.4

38.8

Minor BPS

50.5

-0

1.9

64.56

40.9

Associated Gene:

Gene:

CLIC5

Ensembl Gene ID:

ENSAPLG00000013722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046418

111692133 - 111743715

51583

ENSAPLT00000014302

111693546 - 111758593

65048