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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111717109_111717434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111717109 - 111717434

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

GATTCCATGACC

Flanking Amino Acid:

VFNVTTVDLKRKPADLHNLA

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

89.7

0.89

0.6

85.1

22.4

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

65.1

0.46

1.6

73.1

37.3

Associated Gene:

Gene:

CLIC5

Ensembl Gene ID:

ENSAPLG00000013722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046418

111692133 - 111743715

51583

ENSAPLT00000014302

111693546 - 111758593

65048