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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111717545_111743652_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111717545 - 111743652

Intron Length:

26108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCATCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CATATCTGAACT

Flanking Amino Acid:

KDPEIELFVKAGIDGESIGN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

73.2

39.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

76.1

0.59

0.8

73.4

31.2

Minor 5ss

44.2

-0.6

2.9

59.3

45.5

Minor BPS

61.7

0.44

1.5

74.66

41.7

Associated Gene:

Gene:

CLIC5

Ensembl Gene ID:

ENSAPLG00000013722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046418

111692133 - 111743715

51583