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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111717545_111758101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111717545 - 111758101

Intron Length:

40557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCATCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CATATCTGAACT

Flanking Amino Acid:

EDHEIFLFVKAGIDGESIGN

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

76.1

0.59

0.8

73.4

31.2

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

61.7

0.44

1.5

74.66

41.7

Associated Gene:

Gene:

CLIC5

Ensembl Gene ID:

ENSAPLG00000013722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014302

111693546 - 111758593

65048