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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111804860_111812804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111804860 - 111812804

Intron Length:

7945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGGCCTTTGATC

Flanking Amino Acid:

LLYAVSKLGPGEKYELHAGT

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

72.7

44.5

Major BPS

0.85

0.9

39.9

Major PPT

81.8

0.71

0.8

72.8

37.5

Minor 5ss

41.5

-0.9

3.1

55.8

48.4

Minor BPS

0.3

1.2

63.4

36.6

Associated Gene:

Gene:

RCAN2

Ensembl Gene ID:

ENSAPLG00000026664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025620

111804699 - 111878563

73865

ENSAPLT00000027271

111804699 - 111874945

70247