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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111870337_111877695_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111870337 - 111877695

Intron Length:

7359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TCCATGCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACCAT

U12 Branch Point Sequence:

TGTAACATAACC

Flanking Amino Acid:

AAEAEPASAAGMRGDSYFFG

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

81.4

32.1

Major BPS

57.8

0.19

1.3

67.1

39.2

Major PPT

66.2

0.36

0.9

57.5

38.5

Minor 5ss

32.5

-2

3.1

40.7

45.3

Minor BPS

55.5

0.15

1.9

70.69

39.5

Associated Gene:

Gene:

RCAN2

Ensembl Gene ID:

ENSAPLG00000026664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025620

111804699 - 111878563

73865