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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111893196_111896596_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111893196 - 111896596

Intron Length:

3401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATCGAA

U12 Branch Point Sequence:

GGATATCGAACA

Flanking Amino Acid:

FGGGKHQCPGRWFAIMEIQL

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.6

32.8

Major BPS

56.7

0.17

1.2

56.4

40.6

Major PPT

92.5

0.96

0.6

88.3

21.4

Minor 5ss

27.4

-2.6

2.9

31.8

42.6

Minor BPS

43.8

-0.4

1.8

53.11

37.9

Associated Gene:

Gene:

CYP39A1

Ensembl Gene ID:

ENSAPLG00000013275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030197

111891338 - 111914583

23246

ENSAPLT00000013842

111891973 - 111914216

22244