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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111899453_111900452_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

111899453 - 111900452

Intron Length:

1000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAT

5'SS Class:

strong_major

3'SS Sequence:

CATGCCACAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CATGCCACAACA

Flanking Amino Acid:

EDLTSVFGKAGKDKIEVSEE

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

82.6

29.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

59.5

0.21

52.1

36.4

Minor 5ss

35.2

-1.7

49.1

46.7

Minor BPS

48.5

-0.1

61.91

43.8

Associated Gene:

Gene:

CYP39A1

Ensembl Gene ID:

ENSAPLG00000013275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030197

111891338 - 111914583

23246

ENSAPLT00000013842

111891973 - 111914216

22244