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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111905043_111906496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111905043 - 111906496

Intron Length:

1454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCGTCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTCAC

U12 Branch Point Sequence:

TCTCCTGTAAGT

Flanking Amino Acid:

KGAGDLNDLVRHVMYPAVVN

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

58.3

0.21

1.1

61.1

36.4

Major PPT

79.2

0.66

0.8

72.7

32.1

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

0.01

2.3

72.56

44.8

Associated Gene:

Gene:

CYP39A1

Ensembl Gene ID:

ENSAPLG00000013275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030197

111891338 - 111914583

23246

ENSAPLT00000013842

111891973 - 111914216

22244