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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111908091_111914036_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111908091 - 111914036

Intron Length:

5946

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATAAA

U12 Branch Point Sequence:

GTAAAAGTAACA

Flanking Amino Acid:

LEFIEQARSKHGPVFTVFAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

58.5

0.21

1.1

59.9

32.5

Major PPT

80.4

0.68

0.8

72.1

37.9

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

42.5

-0.5

2.3

56.59

41.5

Associated Gene:

Gene:

CYP39A1

Ensembl Gene ID:

ENSAPLG00000013275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013842

111891973 - 111914216

22244