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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111939930_111940563_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111939930 - 111940563

Intron Length:

634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGTTGATCAATT

Flanking Amino Acid:

NDSNKKMITIKGSVHQSFPD

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

77.6

32.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.74

0.8

77.1

36.1

Minor 5ss

35.7

-1.6

3.2

45.3

36.6

Minor BPS

48.9

-0

2.2

74.39

42.3

Associated Gene:

Gene:

PLA2G7

Ensembl Gene ID:

ENSAPLG00000012546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043476

111939310 - 111950400

11091

ENSAPLT00000013131

111939310 - 111947833

8524