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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111977087_111977953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111977087 - 111977953

Intron Length:

867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAATTTTG

5'SS Class:

major

3'SS Sequence:

CTTTGCCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

TTTGCCTTACAG

Flanking Amino Acid:

QTYLKFEKLDGCWSYVGDLQ

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

71.6

40.9

Major BPS

0.42

1.3

60.1

46.3

Major PPT

83.3

0.75

0.8

76.4

32.3

Minor 5ss

43.4

-0.7

2.8

50.1

46.2

Minor BPS

58.4

0.12

1.9

68.4

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005634

111972957 - 111985609

12653