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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111996608_111997290_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111996608 - 111997290

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTCAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATACAAT

U12 Branch Point Sequence:

TCGGAGATAACC

Flanking Amino Acid:

LERLNRMYNCTSTHTFLDQC

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

39.5

Major BPS

56.4

0.16

1.3

65.1

38.1

Major PPT

100

1.12

0.4

100

Minor 5ss

38.1

-1.3

3.1

55.9

42.3

Minor BPS

40.6

-0.7

2.4

51.67

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004939

111988823 - 112004762

15940