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Intron Name: Anas_platyrhynchos_platyrhynchos_3_111997441_112000303_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

111997441 - 112000303

Intron Length:

2863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAAGTAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTTTTTTTCACA

Flanking Amino Acid:

EDHTVSGRCSDAGYFMYFDT

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

34.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

94.4

0.5

91.2

20.6

Minor 5ss

35.5

-1.6

3.4

46.5

Minor BPS

69.5

0.61

1.7

82.25

33.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004939

111988823 - 112004762

15940