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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112010819_112011958_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112010819 - 112011958

Intron Length:

1140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TTCTGTCTAATC

Flanking Amino Acid:

RTFNNLCGKTGKYTVSSSEP

Intron Amino Acid Position:

1298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.5

30.7

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

88.9

0.88

0.7

Minor 5ss

39.1

-1.2

3.1

51.5

45.7

Minor BPS

49.6

-0

2.1

66.2

40.3

Associated Gene:

Gene:

ADGRF5

Ensembl Gene ID:

ENSAPLG00000004634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019507

112010742 - 112048229

37488

ENSAPLT00000004795

112010742 - 112032379

21638