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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112019489_112021040_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112019489 - 112021040

Intron Length:

1552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGATACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTTTCTTGATA

Flanking Amino Acid:

SQNIQLKLTPESSISCTENF

Intron Amino Acid Position:

660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

81.2

0.7

0.9

76.6

36.7

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

80.4

0.95

0.9

85.58

26.2

Associated Gene:

Gene:

ADGRF5

Ensembl Gene ID:

ENSAPLG00000004634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019507

112010742 - 112048229

37488

ENSAPLT00000004795

112010742 - 112032379

21638