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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112025147_112025645_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112025147 - 112025645

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATAAT

U12 Branch Point Sequence:

TAATGCAGAACA

Flanking Amino Acid:

IPSSFTTEITNERNITVSPE

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

0.9

79.6

29.3

Major BPS

67.7

0.44

1.1

67.9

34.4

Major PPT

80.6

0.69

0.8

72.6

37.5

Minor 5ss

45.6

-0.5

2.8

59.8

Minor BPS

47.5

-0.1

2.1

63.92

41.5

Associated Gene:

Gene:

ADGRF5

Ensembl Gene ID:

ENSAPLG00000004634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019507

112010742 - 112048229

37488

ENSAPLT00000004795

112010742 - 112032379

21638