Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_112026500_112027008_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112026500 - 112027008

Intron Length:

509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAATGACT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

KKYKDDFENAFLQSYTCLSG

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

69.3

Major BPS

0.72

78.4

31.2

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

35.5

-1.7

3.2

51.1

45.1

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

ADGRF5

Ensembl Gene ID:

ENSAPLG00000004634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019507

112010742 - 112048229

37488

ENSAPLT00000004795

112010742 - 112032379

21638