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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112032282_112033294_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

112032282 - 112033294

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

ATCTCCTGATTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

78.8

0.71

67.6

40.6

Major PPT

81.8

0.72

0.8

73.6

36.9

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

55.3

0.14

1.7

65.52

40.4

Associated Gene:

Gene:

ADGRF5

Ensembl Gene ID:

ENSAPLG00000004634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019507

112010742 - 112048229

37488