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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112081908_112082723_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112081908 - 112082723

Intron Length:

816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCAAAG

5'SS Class:

major

3'SS Sequence:

CTTCCTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

GTTTTCTTAACC

Flanking Amino Acid:

LSRTGSFITKEKKDTVLRQV

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

62.7

43.6

Major BPS

82.2

0.8

71.9

35.8

Major PPT

82.9

0.74

0.7

77.1

24.8

Minor 5ss

37.3

-1.4

3.1

48.6

47.1

Minor BPS

85.2

1.08

86.92

29.7

Associated Gene:

Gene:

TNFRSF21

Ensembl Gene ID:

ENSAPLG00000003358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020824

112080846 - 112109356

28511

ENSAPLT00000003436

112080846 - 112109356

28511