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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112105129_112107022_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112105129 - 112107022

Intron Length:

1894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGTGC

5'SS Class:

major

3'SS Sequence:

TCTCCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

TGACACTGAGCT

Flanking Amino Acid:

EAPPTAHLPKGLNSSVPDLA

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

64.8

42.3

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

82.8

0.74

0.7

77.1

24.8

Minor 5ss

42.6

-0.8

3.2

59.3

45.5

Minor BPS

47.1

-0.1

1.9

66.09

43.2

Associated Gene:

Gene:

TNFRSF21

Ensembl Gene ID:

ENSAPLG00000003358

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020824

112080846 - 112109356

28511

ENSAPLT00000003436

112080846 - 112109356

28511